[Pvfs2-users] Problems with xattr settings with long arguments

Phil Carns carns at mcs.anl.gov
Mon Oct 27 10:57:42 EST 2008


Tony Kew wrote:
> Dear Phil,
> 
> That fixed it - I successfully ran a 64 node PBS job with a built on the
> fly PVFS filesystem & ran a 64 node iozone job against the filesystem

Great- glad that fixed your problem.

> The test dir was set up with 16K strips on each node for a 1024K stripe.
> iozone set up to write in 1024K blocks.  The job took about an hour and
> five minutes to run...
> 
> Initial write 668,321.05 KB/sec
>      Rewrite 677,999.64 KB/sec
>         Read 300,937.30 KB/sec
>      Re-read 313,756.56 KB/sec

You realize that you can create this same setup with the default simple 
stripe distribution too if you use a 16K strip size, right?

> 3 of the 64 nodes showed some timeouts in their server longs from the
> job, but I believe these are non fatal, e.g.:

> [E 10/24 17:25] job_time_mgr_expire: job time out: cancelling flow 
> operation, jo
> b_id: 3679067.

These aren't fatal, but if you get them frequently in your workload then 
  it is probably going to have a negative impact on your performance.

> I haven't tried setting <StorageHints> TroveMethod alt-aio
> or increasing "ServerJobFlowTimeoutSecs" yet as you suggested to Brian yet.
> In the latter case, the pvfs2-genconfig option:  --server-job-timeout 300
> sets both "ServerJobFlowTimeoutSecs" and "ServerJobBMITimeoutSecs" to 300
> presumably this is what you want ?

Yes, that should work.

> Incidentally, what does the "alt-io" option do?

It switches the pvfs2 server from using the standard glibc aio 
implementation to using its own alternative implementation.  The latter 
works better for PVFS workloads because it eliminates some thread 
synchronization and imposes fewer ordering constraints on the I/O.

-Phil

> Thanks Much,
> Tony
> 
> Tony Kew
> SAN Administrator
> The Center for Computational Research
> New York State Center of Excellence
> in Bioinformatics & Life Sciences
> 701 Ellicott Street, Buffalo, NY 14203
> 
> CoE Office: (716) 881-8930           Fax: (716) 849-6656
> CSE Office: (716) 645-3797 x2174
>      Cell: (716) 560-0910          Home: (716) 874-2126
> 
> "I love deadlines, I love the whooshing noise they make as they go by."
>                                                          Douglas Adams
> 


More information about the Pvfs2-users mailing list